Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Embryonic fibroblast
Cell type
Swiss 3T3 Cells
MeSH Description
A cell line established in 1962 from disaggregated Swiss albino mouse embryos. This fibroblast cell line is extremely popular in research.

Attributes by original data submitter

Sample

source_name
Input, Serum-starved (72h) Swiss 3T3 fibroblasts
cell line
Swiss 3T3
cell type
fibroblasts
antibody
none

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
53869819
Reads aligned (%)
97.3
Duplicates removed (%)
16.0
Number of peaks
391 (qval < 1E-05)

mm9

Number of total reads
53869819
Reads aligned (%)
97.0
Duplicates removed (%)
15.9
Number of peaks
620 (qval < 1E-05)

Base call quality data from DBCLS SRA