Antigen

Antigen Class

Histone

Antigen

H3K4me1

Cell type

Cell type Class

Liver

Cell type

Liver

MeSH Description

A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Sample

source_name

Liver

strain

C57BL/6J

chip antibody

Abcam, ab8895

tissue

liver

diet

Control

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Libraries were prepared according to Illumina instructions for RNA-seq or DNA-seq

Sequencing Platform

instrument_model

Illumina HiSeq 2500

mm10

Number of total reads

37998726

Reads aligned (%)

95.7

Duplicates removed (%)

7.9

Number of peaks

17185 (qval < 1E-05)

mm9

Number of total reads

37998726

Reads aligned (%)

95.6

Duplicates removed (%)

7.9

Number of peaks

17139 (qval < 1E-05)