SRX4810465
young Gas1EX replicate 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Muscle
Cell type
Muscle stem cells
NA
NA

Attributes by original data submitter

Sample

strain
mixed
age
2 month
sex
female
tissue
muscle stem cell
genotype
young Gas1EX
replicate
chip-seq replicate 1

Sequenced DNA Library

library_name
LLJC29
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
33673908
Reads aligned (%)
77.0
Duplicates removed (%)
41.8
Number of peaks
17054 (qval < 1E-05)

mm9

Number of total reads
33673908
Reads aligned (%)
76.8
Duplicates removed (%)
41.8
Number of peaks
17032 (qval < 1E-05)

Base call quality data from DBCLS SRA