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Install and launch IGV before selecting data to visualize
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Error connecting to IGV?
Analyze
For dm6
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For dm3
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: NA
wikigenes
PDBj
CellType: Brains and imaginal disc
ATCC
MeSH
RIKEN BRC
SRX4798871
H3K27me3-en80del1.5-2.fastq.gz
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
No description
Antigen
NA
Cell type
Cell type Class
Larvae
Cell type
Brains and imaginal disc
NA
NA
Attributes by original data submitter
Sample
strain
not applicable
isolate
not applicable
breed
not applicable
cultivar
not applicable
ecotype
not applicable
age
not applicable
dev_stage
third instar larval imaginal discs and brains
sex
not collected
tissue
Brains and imaginal discs
genotype
H3K27me3-en80del1.5-2
Sequenced DNA Library
library_name
H3K27me3-en80del1.5-2.fastq.gz
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina HiSeq 2500
Where can I get the processing logs?
Read processing pipeline
log
dm6
Number of total reads
14991244
Reads aligned (%)
83.4
Duplicates removed (%)
33.1
Number of peaks
353 (qval < 1E-05)
dm3
Number of total reads
14991244
Reads aligned (%)
83.6
Duplicates removed (%)
32.6
Number of peaks
421 (qval < 1E-05)
Base call quality data from
DBCLS SRA