Antigen

Antigen Class

ATAC-Seq

Antigen

ATAC-Seq

Cell type

Cell type Class

Blood

Cell type

Hematopoietic Stem Cells

MeSH Description

Progenitor cells from which all blood cells derived. They are found primarily in the bone marrow and also in small numbers in the peripheral blood.

Sample

source_name

Bone Marrow

cell type

haematopoietic stem cell

mouse phenotype

Diabetic

treatment

Streptozotocin (STZ) induction of diabetes

Sex

male

background strain

C57Bl/6

stimulation

10 ng/mL IL-1β

Sequenced DNA Library

library_name

ERROR: cannot retrieve data from NCBI: too many requests

library_strategy

ERROR: cannot retrieve data from NCBI: too many requests

library_source

ERROR: cannot retrieve data from NCBI: too many requests

library_selection

ERROR: cannot retrieve data from NCBI: too many requests

library_construction_protocol

ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model

ERROR: cannot retrieve data from NCBI: too many requests

cycle_sequence

ERROR: cannot retrieve data from NCBI: too many requests

cycle_count

ERROR: cannot retrieve data from NCBI: too many requests

flow_sequence

ERROR: cannot retrieve data from NCBI: too many requests

flow_count

ERROR: cannot retrieve data from NCBI: too many requests

key_sequence

ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads

34088226

Reads aligned (%)

92.9

Duplicates removed (%)

35.0

Number of peaks

30432 (qval < 1E-05)

mm9

Number of total reads

34088226

Reads aligned (%)

92.8

Duplicates removed (%)

35.0

Number of peaks

30442 (qval < 1E-05)