SRX4729616
Human fetal bone-derived skeletal stem cells: PDPN+CD146-CD73+CD164+

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
ATAC-Seq
Antigen
ATAC-Seq

Cell type

Cell type Class
Bone
Cell type
Femur
MeSH Description
The longest and largest bone of the skeleton, it is situated between the hip and the knee.

Attributes by original data submitter

Sample

isolate
Human fetal specimen
age
18-weeks
biomaterial_provider
stemexpress
sex
not determined
tissue
femur

Sequenced DNA Library

library_name
Human_Fetal-1-AAGAGGCA_S3
library_strategy
ATAC-seq
library_source
GENOMIC
library_selection
other

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
63903686
Reads aligned (%)
70.1
Duplicates removed (%)
51.7
Number of peaks
58925 (qval < 1E-05)

hg19

Number of total reads
63903686
Reads aligned (%)
69.8
Duplicates removed (%)
52.3
Number of peaks
58593 (qval < 1E-05)

Base call quality data from DBCLS SRA