Antigen

Antigen Class

TFs and others

Antigen

GATA3

Cell type

Cell type Class

Neural

Cell type

Neurons

NA

NA

Sample

source_name

2 week neuron_homerTF_GATA3_WT126

individual

wt126

Sex

male

sh

none

chip antibody

GATA3, Santa Cruz, sc-22206, lot #J2815

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

ChIP was performed as previously described with minor modifications (Hawkins et al., 2010). Libraries were constructed with the NEBNext® Ultra™ II DNA Library Prep Kit for Illumina (New England Biolabs)

Sequencing Platform

instrument_model

Illumina HiSeq 2500

hg38

Number of total reads

55389735

Reads aligned (%)

98.1

Duplicates removed (%)

32.5

Number of peaks

1496 (qval < 1E-05)

hg19

Number of total reads

55389735

Reads aligned (%)

97.5

Duplicates removed (%)

33.9

Number of peaks

1531 (qval < 1E-05)