SRX471250
GSM1328264: CRE4.K79me2; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K79me2

Cell type

Cell type Class
Blood
Cell type
Leukemic bone marrow
NA
NA

Attributes by original data submitter

Sample

source_name
Leukemic bone marrow
background strain
C57BL/6
tissue
bone marrow
diagnosis
leukemia
chip antibody
Ab3594 Abcam

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Standard Illumina TruSeq DNA sample preparation protocol for the library prep

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
30600591
Reads aligned (%)
91.7
Duplicates removed (%)
5.2
Number of peaks
182 (qval < 1E-05)

mm9

Number of total reads
30600591
Reads aligned (%)
91.6
Duplicates removed (%)
5.5
Number of peaks
176 (qval < 1E-05)

Base call quality data from DBCLS SRA