Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Neural
Cell type
Glioblastoma stem cells
NA
NA

Attributes by original data submitter

Sample

source_name
glioblastoma stem cells
cell line
1552
input
NONE

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
6787422
Reads aligned (%)
98.6
Duplicates removed (%)
0.6
Number of peaks
350 (qval < 1E-05)

hg19

Number of total reads
6787422
Reads aligned (%)
97.9
Duplicates removed (%)
1.9
Number of peaks
361 (qval < 1E-05)

Base call quality data from DBCLS SRA