Antigen

Antigen Class

Histone

Antigen

H3K4me3

Cell type

Cell type Class

Gonad

Cell type

Testis

MeSH Description

The male gonad containing two functional parts: the SEMINIFEROUS TUBULES for the production and transport of male germ cells (SPERMATOGENESIS) and the interstitial compartment containing LEYDIG CELLS that produce ANDROGENS.

Sample

source_name

Whole testis

genotype

Ankrd31 +/+

Sex

male

age

Adult

antibody

Anti-H3K4me3 Millipore (#07-473)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

As described in Smagulova et al., 2011, Brick et al., 2012 As described in Smagulova et al., 2011, Brick et al., 2012

Sequencing Platform

instrument_model

Illumina HiSeq 2500

mm10

Number of total reads

52572555

Reads aligned (%)

97.2

Duplicates removed (%)

12.1

Number of peaks

15419 (qval < 1E-05)

mm9

Number of total reads

52572555

Reads aligned (%)

97.1

Duplicates removed (%)

12.3

Number of peaks

15586 (qval < 1E-05)