SRX444197
Lamin A ChIP-seq in human dermal fibroblasts (lonza cc22511)

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Epidermis
Cell type
Dermal fibroblast
NA
NA

Attributes by original data submitter

Sample

collection_date
2012
geo_loc_name
Norway
age
24
body_site
Skin, arm
label
AD04DF_LMNA
biomaterial_provider
NCSCR
tissue_type
Skin
sex
male
phenotype
Caucasian
cell_type
Dermal fibroblast
dev_stage
Adult

Sequenced DNA Library

library_name
AD04DF_LMNA
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
132245767
Reads aligned (%)
98.1
Duplicates removed (%)
9.8
Number of peaks
3057 (qval < 1E-05)

hg19

Number of total reads
132245767
Reads aligned (%)
97.1
Duplicates removed (%)
11.8
Number of peaks
2185 (qval < 1E-05)

Base call quality data from DBCLS SRA