SRX444062
Lamin A ChIP-seq in human dermal fibroblasts

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Epidermis
Cell type
Dermal fibroblast
NA
NA

Attributes by original data submitter

Sample

collection_date
Commercial
cell_line
Lonza, CC-2511
cell_type
Dermal fibroblast
dev_stage
Adult
tissue_type
Skin
label
LDF_LMNA

Sequenced DNA Library

library_name
LDF_LMNA
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
61675956
Reads aligned (%)
94.6
Duplicates removed (%)
12.5
Number of peaks
1454 (qval < 1E-05)

hg19

Number of total reads
61675956
Reads aligned (%)
93.7
Duplicates removed (%)
14.1
Number of peaks
1527 (qval < 1E-05)

Base call quality data from DBCLS SRA