SRX4408800
ChIP-Seq of mus musculus:adult male PFC

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Unclassified
Cell type
Unclassified
NA
NA

Attributes by original data submitter

Sample

strain
C57BL/6
age
10-12 week old
sex
male
tissue
N6amt1 pull down from PFC, EXT #3

Sequenced DNA Library

library_name
S10
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 4000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
27353622
Reads aligned (%)
86.1
Duplicates removed (%)
15.4
Number of peaks
207 (qval < 1E-05)

mm9

Number of total reads
27353622
Reads aligned (%)
85.8
Duplicates removed (%)
15.7
Number of peaks
182 (qval < 1E-05)

Base call quality data from DBCLS SRA