Antigen

Antigen Class

DNase-seq

Antigen

DNase-Seq

Cell type

Cell type Class

Kidney

Cell type

786-O

Primary Tissue

Kidney

Tissue Diagnosis

Adenocarcinoma

Sample

source_name

Human renal cell carcinoma cultures

patient age

58

gender

male

cell line

ATCC:CRL-1932, cell line

Sequenced DNA Library

library_strategy

DNase-Hypersensitivity

library_source

GENOMIC

library_selection

DNase

library_construction_protocol

PEG precipitation and size fractionation of DNA Low-input single-stranded library construction protocol as per PMIDs 23493070 & 26771485

Sequencing Platform

instrument_model

Illumina HiSeq 2500

hg38

Number of total reads

354066105

Reads aligned (%)

79.8

Duplicates removed (%)

63.6

Number of peaks

100001 (qval < 1E-05)

hg19

Number of total reads

354066105

Reads aligned (%)

79.2

Duplicates removed (%)

64.4

Number of peaks

97852 (qval < 1E-05)