Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Prostate
Cell type
RWPE-1
Primary Tissue
Prostate
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
non-malignant prostate cell line infected with BAC-RARG-EGFP
gender
male
cell line
RWPE-1
cell type
non-malignant prostate epithelial cell
ip
GFP
treatment
DMSO
treatment time
2hr

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
44112925
Reads aligned (%)
97.6
Duplicates removed (%)
25.1
Number of peaks
1377 (qval < 1E-05)

hg19

Number of total reads
44112925
Reads aligned (%)
96.8
Duplicates removed (%)
26.4
Number of peaks
878 (qval < 1E-05)

Base call quality data from DBCLS SRA