Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
TBP

Cell type

Cell type Class
Lung
Cell type
Bronchial tracheal epithelial cells
NA
NA

Attributes by original data submitter

Sample

source_name
HBTEC_wt_MOI5_dl312_Pol2_12hpi
Sex
male
cell type
Primary Human Bronchial/Tracheal Epithelial Cells (HBTEC)
infected with
a mixture of the wt E1A-expressing vector at an MOI of 5 with an Ad5 mutant containing an E1A deletion (dl312) at an MOI of 95
passage
<28
chip antibody
Mouse monoclonal anti-TBP Diagenode Cat#C15200002
molecule subtype
genomic DNA and viral DNA

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
40218561
Reads aligned (%)
18.5
Duplicates removed (%)
15.5
Number of peaks
13874 (qval < 1E-05)

hg38

Number of total reads
40218561
Reads aligned (%)
18.8
Duplicates removed (%)
15.0
Number of peaks
13834 (qval < 1E-05)

Base call quality data from DBCLS SRA