SRX4344456
daf-2; HLH-30::GFP ChIP-SEQ replicate IP 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Adult
Cell type
Whole worm
NA
NA

Attributes by original data submitter

Sample

replicate
biological replicate 1
strain
RIE328_2
age
Day 1 adult
sex
hermaphrodite
tissue
whole animal

Sequenced DNA Library

library_name
s31_daf2_HLH30_GFP_CHIP_IP_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
6890646
Reads aligned (%)
66.3
Duplicates removed (%)
32.3
Number of peaks
2571 (qval < 1E-05)

ce10

Number of total reads
6890646
Reads aligned (%)
66.3
Duplicates removed (%)
32.3
Number of peaks
2571 (qval < 1E-05)

Base call quality data from DBCLS SRA