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For sacCer3
BigWig
Peak-call (q < 1E-05)
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Peak-call (q < 1E-20)
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For sacCer3
Colocalization
Target Genes (TSS ± 1kb)
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For sacCer3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: NA
wikigenes
PDBj
CellType: EKY22
ATCC
MeSH
RIKEN BRC
SRX4337744
ChIP-seq of Saccharomyces cerevisiae:kin28-TBP AA-PolII
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
No description
Antigen
NA
Cell type
Cell type Class
Yeast strain
Cell type
EKY22
NA
NA
Attributes by original data submitter
Sample
strain
EKY22
host
not applicable
isolation_source
not applicable
collection_date
2018-03
geo_loc_name
USA: New York
sample_type
cultured yeast
data type
ChIP-seq
paired end
Yes
ChIP-target
Rpb1
Rapamycin_info
kin28,TBP-AA
Sequenced DNA Library
library_name
kin28-TBP_AA-PolII
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
NextSeq 500
Where can I get the processing logs?
Read processing pipeline
log
sacCer3
Number of total reads
3891407
Reads aligned (%)
62.7
Duplicates removed (%)
51.6
Number of peaks
615 (qval < 1E-05)
Base call quality data from
DBCLS SRA