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For sacCer3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For sacCer3
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
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For sacCer3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: NA
wikigenes
PDBj
CellType: EKY28
ATCC
MeSH
RIKEN BRC
SRX4337739
ChIP-seq of Saccharomyces cerevisiae:TBP AAR-TBP
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
No description
Antigen
NA
Cell type
Cell type Class
Yeast strain
Cell type
EKY28
NA
NA
Attributes by original data submitter
Sample
strain
EKY8
host
not applicable
isolation_source
not applicable
collection_date
2016-06
geo_loc_name
USA: New York
sample_type
cultured yeast
data type
ChIP-seq
paired end
No
ChIP-target
TBP
Rapamycin_info
TBP-AA plus rapamycin
Sequenced DNA Library
library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests
Sequencing Platform
instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests
Where can I get the processing logs?
Read processing pipeline
log
sacCer3
Number of total reads
13237212
Reads aligned (%)
20.6
Duplicates removed (%)
22.3
Number of peaks
343 (qval < 1E-05)
Base call quality data from
DBCLS SRA