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For sacCer3
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Peak-call (q < 1E-05)
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For sacCer3
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For sacCer3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: NA
wikigenes
PDBj
CellType: RMY1331
ATCC
MeSH
RIKEN BRC
SRX4337724
ChIP-seq of Saccharomyces cerevisiae:kin28-TBP AAR-Med2
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
No description
Antigen
NA
Cell type
Cell type Class
Yeast strain
Cell type
RMY1331
NA
NA
Attributes by original data submitter
Sample
strain
RMY1331
host
not applicable
isolation_source
not applicable
collection_date
2018-03
geo_loc_name
USA: New York
sample_type
cultured yeast
data type
ChIP-seq
paired end
Yes
ChIP-target
med2
Rapamycin_info
kin28,TBP-AA plus rapamycin
Sequenced DNA Library
library_name
kin28-TBP_AAR-Med2-rep2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
NextSeq 500
Where can I get the processing logs?
Read processing pipeline
log
sacCer3
Number of total reads
7775715
Reads aligned (%)
40.9
Duplicates removed (%)
31.1
Number of peaks
358 (qval < 1E-05)
Base call quality data from
DBCLS SRA