SRX4279687
Rhino ChIP DNA from thoc5[e00906]/thoc5[1]

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
rhi

Cell type

Cell type Class
Adult
Cell type
Ovary
NA
NA

Attributes by original data submitter

Sample

strain
thoc5[e00906]/thoc5[1]
age
2-4 days
sex
female
tissue
ovary
sample_type
ChIP DNA
target
Rhino

Sequenced DNA Library

library_name
Rhino ChIP DNA from thoc5[e00906]/thoc5[1]_rep1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

dm3

Number of total reads
30100905
Reads aligned (%)
43.9
Duplicates removed (%)
59.1
Number of peaks
3075 (qval < 1E-05)

dm6

Number of total reads
30100905
Reads aligned (%)
24.6
Duplicates removed (%)
72.5
Number of peaks
1630 (qval < 1E-05)

Base call quality data from DBCLS SRA