Sample information curated by ChIP-Atlas

Antigen

Antigen Class
ATAC-Seq
Antigen
ATAC-Seq

Cell type

Cell type Class
Blood
Cell type
Innate lymphoid cells
NA
NA

Attributes by original data submitter

Sample

source_name
CCR6+ILC3 from SI
strain
C57BL/6
tissue
innate lymphoid cells of the small intestine (SI)
genotype
wild type
treatment
steady state

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
37133655
Reads aligned (%)
93.1
Duplicates removed (%)
35.4
Number of peaks
38310 (qval < 1E-05)

mm9

Number of total reads
37133655
Reads aligned (%)
93.0
Duplicates removed (%)
35.6
Number of peaks
38310 (qval < 1E-05)

Base call quality data from DBCLS SRA