Antigen

Antigen Class

No description

Antigen

NA

Cell type

Cell type Class

Blood

Cell type

Thymocytes

MeSH Description

HEMATOPOIETIC PROGENITOR CELLS that have migrated to the THYMUS where they differentiate into T-LYMPHOCYTES. Thymocytes are classified into maturational stages based on the expression of CELL SURFACE ANTIGENS.

Sample

strain

C57BL/6

age

6-8weeks

sex

pooled male and female

tissue

thymocyte

genotype

K31R

Sequenced DNA Library

library_name

K31R-thymocyte ChIP-seq rep1.zip

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina HiSeq 2500

mm10

Number of total reads

54663688

Reads aligned (%)

98.5

Duplicates removed (%)

15.8

Number of peaks

4061 (qval < 1E-05)

mm9

Number of total reads

54663688

Reads aligned (%)

98.2

Duplicates removed (%)

15.8

Number of peaks

3942 (qval < 1E-05)