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For sacCer3
BigWig
Peak-call (q < 1E-05)
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Peak-call (q < 1E-20)
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For sacCer3
Colocalization
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For sacCer3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: NA
wikigenes
PDBj
CellType: BY4741
ATCC
MeSH
RIKEN BRC
SRX4233964
ChIP-Seq alpha factor to HU time course WT 3h alpha factor ChIP SEQ 8WG16 RNA polymerase 2 Set2 R
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
No description
Antigen
NA
Cell type
Cell type Class
Yeast strain
Cell type
BY4741
NA
NA
Attributes by original data submitter
Sample
strain
BY4741
isolate
not applicable
host
not applicable
isolation_source
not applicable
collection_date
2017-06-20
geo_loc_name
not applicable
sample_type
cell culture
genotype
WT
mating_type
a
time-point
3h alpha factor
data type
ChIP-SEQ 8WG16 RNA polymerase 2
experiment scheme
alpha-factor to HU time-course
repeat
2
Sequenced DNA Library
library_name
alpha_factor_to_HU_time_course_WT_3h_alpha_factor_ChIP_SEQ_8WG16_RNA_polymerase_2_Set2_R
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
NextSeq 500
Where can I get the processing logs?
Read processing pipeline
log
sacCer3
Number of total reads
3182804
Reads aligned (%)
89.8
Duplicates removed (%)
20.3
Number of peaks
885 (qval < 1E-05)
Base call quality data from
DBCLS SRA