SRX4233635
ChIP-Seq alpha factor to HU time course paf1 3h alpha factor ChIP SEQ input Set1 R

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Yeast strain
Cell type
BY4741
NA
NA

Attributes by original data submitter

Sample

strain
BY4741
isolate
not applicable
host
not applicable
isolation_source
not applicable
collection_date
2017-10-02
geo_loc_name
not applicable
sample_type
cell culture
genotype
d(paf1)
mating_type
a
time-point
3h alpha factor
data type
ChIP-SEQ input
experiment scheme
alpha-factor to HU time-course
repeat
1

Sequenced DNA Library

library_name
alpha_factor_to_HU_time_course_paf1_3h_alpha_factor_ChIP_SEQ_input_Set1_R
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

sacCer3

Number of total reads
1401666
Reads aligned (%)
94.7
Duplicates removed (%)
13.8
Number of peaks
41 (qval < 1E-05)

Base call quality data from DBCLS SRA