Toggle navigation
Peak Browser
Enrichment Analysis
Diff Analysis
Target Genes
Colocalization
Publications
Docs
Search
Go
Find By ID
Visualize
Install and launch IGV before selecting data to visualize
For sacCer3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Error connecting to IGV?
Analyze
For sacCer3
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For sacCer3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: NA
wikigenes
PDBj
CellType: JRY9317
ATCC
MeSH
RIKEN BRC
SRX423270
Sir4-13xMyc Sonication IP Biological Replicate 2
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
No description
Antigen
NA
Cell type
Cell type Class
Yeast strain
Cell type
JRY9317
NA
NA
Attributes by original data submitter
Sample
strain
JRY9317
isolate
W303
label
Sir4_Sonication_IP_BioRep2
collection_date
8/24/10
Sequenced DNA Library
library_name
Sir4_Sonication_IP_BioRep2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer II
Where can I get the processing logs?
Read processing pipeline
log
sacCer3
Number of total reads
31108626
Reads aligned (%)
80.5
Duplicates removed (%)
66.7
Number of peaks
1200 (qval < 1E-05)
Base call quality data from
DBCLS SRA