Antigen

Antigen Class

DNase-seq

Antigen

DNase-Seq

Cell type

Cell type Class

Kidney

Cell type

Kidney immortalized cell line

NA

NA

Sample

source_name

Human kidney immortalized cell line

patient age

3

gender

male

assay

DNase-seq

Sequenced DNA Library

library_strategy

DNase-Hypersensitivity

library_source

GENOMIC

library_selection

DNase

library_construction_protocol

PEG precipitation and size fractionation of DNA Low-input single-stranded library construction protocol as per PMIDs 23493070 & 26771485 DNase-seq

Sequencing Platform

instrument_model

Illumina HiSeq 2500

hg38

Number of total reads

154341400

Reads aligned (%)

86.7

Duplicates removed (%)

12.6

Number of peaks

88706 (qval < 1E-05)

hg19

Number of total reads

154341400

Reads aligned (%)

86.1

Duplicates removed (%)

13.2

Number of peaks

88029 (qval < 1E-05)