Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Yap1

Cell type

Cell type Class
Cardiovascular
Cell type
Heart
MeSH Description
The hollow, muscular organ that maintains the circulation of the blood.

Attributes by original data submitter

Sample

source_name
heart tissue
phenotype
wild-type
surgical procedure
sham
days post-surgery
7
antibody
anti-YAP1 (US Biological; Y1200-01D)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Heart were surgically removed and snap frozen and shipped to Active Motif for ChIP-Seq Library was constructed by Active Motif (https://www.activemotif.com/)

Sequencing Platform

instrument_model
NextSeq 500

mm10

Number of total reads
27262316
Reads aligned (%)
96.3
Duplicates removed (%)
27.4
Number of peaks
9584 (qval < 1E-05)

mm9

Number of total reads
27262316
Reads aligned (%)
96.3
Duplicates removed (%)
27.4
Number of peaks
9595 (qval < 1E-05)

Base call quality data from DBCLS SRA