GSM3142817: Aska shCt ATAC rep1; Homo sapiens; ATAC-seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
ATAC-Seq
Antigen
ATAC-Seq
Cell type
Cell type Class
Others
Cell type
Aska
NA
NA
Attributes by original data submitter
Sample
source_name
Aska shCt ATAC-seq
cell line
Aska
cell type
Synovial sarcoma (SS) cell line
infected with
shControl
Sequenced DNA Library
library_strategy
ATAC-seq
library_source
GENOMIC
library_selection
other
library_construction_protocol
Cells were harvested following 48-hour exposure to lentivirus and 5 days of selection with 2 µg/ml of puromycin and ATAC-seq experiments were performed as previously described (Buenrostro et al., 2015). All library prep and sequencing were 75bp paired end on Illuminia Nextseq 500