Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Embryo
Cell type
Embryos
NA
NA

Attributes by original data submitter

Sample

strain
yw
isolate
not applicable
breed
not applicable
cultivar
not applicable
ecotype
not applicable
age
3:45-4:45 h
dev_stage
embryo
sex
pooled male and female
tissue
egg
genotype
wt
sample_type
H3K4me3 IP
treatment
control
Replicate no.
2
Run no.
2
file no.
1

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

dm6

Number of total reads
18863915
Reads aligned (%)
88.9
Duplicates removed (%)
48.7
Number of peaks
6321 (qval < 1E-05)

dm3

Number of total reads
18863915
Reads aligned (%)
89.0
Duplicates removed (%)
48.1
Number of peaks
6732 (qval < 1E-05)

Base call quality data from DBCLS SRA