Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Gonad
Cell type
Male germ cells
NA
NA

Attributes by original data submitter

Sample

source_name
male germ cells
age
14 days post-partum
strain
BXD71
ChIP
H3K4me3
antibody
H3K4me3 (Millipore, 07-473, lot 2746331)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
54214199
Reads aligned (%)
84.6
Duplicates removed (%)
40.1
Number of peaks
75744 (qval < 1E-05)

mm9

Number of total reads
54214199
Reads aligned (%)
84.5
Duplicates removed (%)
40.1
Number of peaks
75717 (qval < 1E-05)

Base call quality data from DBCLS SRA