Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Neural
Cell type
Anterior cingulate cortex
NA
NA

Attributes by original data submitter

Sample

source_name
Adult (P56) cortical tissue
strain
C57BL6J
tissue
anterior cingulate cortex (ACC)
h3k27ac antibody
Diagenode (pAb-196-050) lot # A1723-0041D
h3k4me2 antibody
ab7777 (Lot GR102810-2)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

mm10

Number of total reads
39906020
Reads aligned (%)
96.3
Duplicates removed (%)
12.4
Number of peaks
58327 (qval < 1E-05)

mm9

Number of total reads
39906020
Reads aligned (%)
96.2
Duplicates removed (%)
12.4
Number of peaks
58316 (qval < 1E-05)

Base call quality data from DBCLS SRA