Antigen

Antigen Class

TFs and others

Antigen

Ncoa2

Cell type

Cell type Class

Liver

Cell type

Liver

MeSH Description

A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Sample

source_name

Liver

strain

C57BL/6

tissue

Liver

developmental stage

Adult

gender

male

genotype/variation

WT

time

ZT18

chip antibody

SRC-2 antibody (Bethyl Laboratories, catalog number A300-346, lot number A-1)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Liver was extracted and flash frozen in liquid nitrogen. The library construction was performed by Active Motif according to their protocol.

Sequencing Platform

instrument_model

Illumina Genome Analyzer II

mm10

Number of total reads

70513460

Reads aligned (%)

97.5

Duplicates removed (%)

59.9

Number of peaks

22326 (qval < 1E-05)

mm9

Number of total reads

70513460

Reads aligned (%)

97.4

Duplicates removed (%)

60.0

Number of peaks

22369 (qval < 1E-05)