Antigen

Antigen Class

Bisulfite-Seq

Antigen

Bisulfite-Seq

Cell type

Cell type Class

Epidermis

Cell type

Epidermis

MeSH Description

The external, nonvascular layer of the skin. It is made up, from within outward, of five layers of EPITHELIUM: (1) basal layer (stratum basale epidermidis); (2) spinous layer (stratum spinosum epidermidis); (3) granular layer (stratum granulosum epidermidis); (4) clear layer (stratum lucidum epidermidis); and (5) horny layer (stratum corneum epidermidis).

Sample

source_name

old sun exposed epidermis 1

gender

male

age

75

exposure

sun exposed

tissue

dermis

Sequenced DNA Library

library_strategy

Bisulfite-Seq

library_source

GENOMIC

library_selection

RANDOM

library_construction_protocol

Epicentre Masterpure Genomic DNA Extraction Bisulfite converted Illumina TruSeq DNA library

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

147552493

Reads aligned (%)

90.8

Coverage rate (×)

2.8

Number of hyper MRs

311227 (qval < 1E-05)

hg19

Number of total reads

147552493

Reads aligned (%)

90.7

Coverage rate (×)

3.1

Number of hyper MRs

301853 (qval < 1E-05)