Antigen

Antigen Class

TFs and others

Antigen

FOXA1

Cell type

Cell type Class

Breast

Cell type

T-47D

Primary Tissue

Breast

Tissue Diagnosis

Adenocarcinoma Ductal

Sample

source_name

A1A3_Brg1KD_Dex_FoxA1_ChIPseq

cell line/type

A1A3 breast cancer cells

treatment

1hr Dex

treatment2

72hrs Doxycycline

chip antibody

Abcam ab23738

Sequenced DNA Library

library_name

ERROR: cannot retrieve data from NCBI: too many requests

library_strategy

ERROR: cannot retrieve data from NCBI: too many requests

library_source

ERROR: cannot retrieve data from NCBI: too many requests

library_selection

ERROR: cannot retrieve data from NCBI: too many requests

library_construction_protocol

ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model

ERROR: cannot retrieve data from NCBI: too many requests

cycle_sequence

ERROR: cannot retrieve data from NCBI: too many requests

cycle_count

ERROR: cannot retrieve data from NCBI: too many requests

flow_sequence

ERROR: cannot retrieve data from NCBI: too many requests

flow_count

ERROR: cannot retrieve data from NCBI: too many requests

key_sequence

ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads

28700611

Reads aligned (%)

97.9

Duplicates removed (%)

4.4

Number of peaks

885 (qval < 1E-05)

hg19

Number of total reads

28700611

Reads aligned (%)

97.1

Duplicates removed (%)

4.6

Number of peaks

836 (qval < 1E-05)