Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562_AID-BRD4_Pol2_IAA
treatment
100µM indole-3-acetic acid, 60 min
cell line
K562
genetic modification
AID-BRD4 / SFFV-OsTir1-T2A-BlastR
antibody
Pol2

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
23397227
Reads aligned (%)
85.1
Duplicates removed (%)
18.7
Number of peaks
19945 (qval < 1E-05)

hg19

Number of total reads
23397227
Reads aligned (%)
84.3
Duplicates removed (%)
18.7
Number of peaks
19879 (qval < 1E-05)

Base call quality data from DBCLS SRA