Sample information curated by ChIP-Atlas

Antigen

Antigen Class
ATAC-Seq
Antigen
ATAC-Seq

Cell type

Cell type Class
Blood
Cell type
Fetal naive T cells
NA
NA

Attributes by original data submitter

Sample

source_name
Fetal spleenocytes
tissue
Fetal spleenocytes
age
22.5 weeks
Sex
Not collected
sequencing adapter
TAGGCATG
cell type
fetal naive T cells

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
26493406
Reads aligned (%)
98.8
Duplicates removed (%)
35.0
Number of peaks
43604 (qval < 1E-05)

hg19

Number of total reads
26493406
Reads aligned (%)
98.4
Duplicates removed (%)
35.0
Number of peaks
43597 (qval < 1E-05)

Base call quality data from DBCLS SRA