Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3

Cell type

Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

source_name
HeLa S3 cells
cell line
HeLa S3
cell type
cervical carcinoma
ezh2i treatment
Non treated
spike-in
NO
labelling
biotin-dUTP
cell cycle
Early S (2 h and 15 min after release)
antibody
Total H3 (Abcam, Cat No. Ab179, RRID:AB_302613)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
207654378
Reads aligned (%)
99.0
Duplicates removed (%)
21.0
Number of peaks
3370 (qval < 1E-05)

hg19

Number of total reads
207654378
Reads aligned (%)
98.4
Duplicates removed (%)
22.6
Number of peaks
2598 (qval < 1E-05)

Base call quality data from DBCLS SRA