Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Liver
Cell type
Liver
MeSH Description
A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Attributes by original data submitter

Sample

isolate
B48
age
34
biomaterial_provider
Penn Transplant Institute
sex
male
tissue
Liver

Sequenced DNA Library

library_name
FGC1261_s_1_CGGCTATG-TAATCTTA
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

hg38

Number of total reads
1367037
Reads aligned (%)
78.2
Duplicates removed (%)
1.8
Number of peaks
111 (qval < 1E-05)

hg19

Number of total reads
1367037
Reads aligned (%)
76.9
Duplicates removed (%)
4.5
Number of peaks
114 (qval < 1E-05)

Base call quality data from DBCLS SRA