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For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For dm6
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For dm3
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: H3K9me3
wikigenes
PDBj
CellType: Ovary
ATCC
MeSH
RIKEN BRC
SRX3630328
GSM2971290: snf[148] 1 H3K9me3; Drosophila melanogaster; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
Histone
Antigen
H3K9me3
Cell type
Cell type Class
Adult
Cell type
Ovary
NA
NA
Attributes by original data submitter
Sample
source_name
snf[148]_ovaries_H3K9me3
full genotype
yw,snf[148]
age
3-5 days
tissue
ovaries
chip antibody
H3K9me3 (abcam 8898)
Sequenced DNA Library
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Lysates were prepared from whole dissected ovaries Libraries were generated using the Rubicon Genomics Library Prep Kit
Sequencing Platform
instrument_model
Illumina HiSeq 2500
Where can I get the processing logs?
Read processing pipeline
log
dm6
Number of total reads
39277236
Reads aligned (%)
95.6
Duplicates removed (%)
69.3
Number of peaks
10927 (qval < 1E-05)
dm3
Number of total reads
39277236
Reads aligned (%)
96.3
Duplicates removed (%)
59.1
Number of peaks
22148 (qval < 1E-05)
Base call quality data from
DBCLS SRA