SRX3630322
GSM2971284: wild type 2 H3K9me3; Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K9me3

Cell type

Cell type Class
Adult
Cell type
Ovary
NA
NA

Attributes by original data submitter

Sample

source_name
wild type_ovaries_H3K9me3
full genotype
yw
age
0-24 hours
tissue
ovaries
chip antibody
H3K9me3 (abcam 8898)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Lysates were prepared from whole dissected ovaries Libraries were generated using the Rubicon Genomics Library Prep Kit

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
25364669
Reads aligned (%)
88.0
Duplicates removed (%)
38.5
Number of peaks
8160 (qval < 1E-05)

dm3

Number of total reads
25364669
Reads aligned (%)
88.9
Duplicates removed (%)
30.6
Number of peaks
14503 (qval < 1E-05)

Base call quality data from DBCLS SRA