SRX362147
Embryonic stem cell p300 ChIP-seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Unclassified
Cell type
Unclassified
NA
NA

Attributes by original data submitter

Sample

strain
D3

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiScanSQ

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
12623417
Reads aligned (%)
84.6
Duplicates removed (%)
20.7
Number of peaks
4500 (qval < 1E-05)

mm9

Number of total reads
12623417
Reads aligned (%)
84.1
Duplicates removed (%)
20.6
Number of peaks
4489 (qval < 1E-05)

Base call quality data from DBCLS SRA