Antigen

Antigen Class

TFs and others

Antigen

SP1

Cell type

Cell type Class

Digestive tract

Cell type

LoVo

Primary Tissue

Colon

Tissue Diagnosis

Adenocarcinoma

Sample

source_name

LoVo

cell line

LoVo

cell type

colon adenocarcinoma

hgn

SP1

antibody

Abcam : ab13370

control sample

batch4_chrom2_LoVo_IgG_Rabbit

qc successful

FailedQC

fraction of peaks close to tss

0.12247

lowest e-value for a high complexity de novo motif

440

Sequenced DNA Library

library_name

ERROR: cannot retrieve data from NCBI: too many requests

library_strategy

ERROR: cannot retrieve data from NCBI: too many requests

library_source

ERROR: cannot retrieve data from NCBI: too many requests

library_selection

ERROR: cannot retrieve data from NCBI: too many requests

library_construction_protocol

ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model

ERROR: cannot retrieve data from NCBI: too many requests

cycle_sequence

ERROR: cannot retrieve data from NCBI: too many requests

cycle_count

ERROR: cannot retrieve data from NCBI: too many requests

flow_sequence

ERROR: cannot retrieve data from NCBI: too many requests

flow_count

ERROR: cannot retrieve data from NCBI: too many requests

key_sequence

ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads

23561540

Reads aligned (%)

93.8

Duplicates removed (%)

55.4

Number of peaks

826 (qval < 1E-05)

hg19

Number of total reads

23561540

Reads aligned (%)

92.5

Duplicates removed (%)

56.5

Number of peaks

629 (qval < 1E-05)