Antigen

Antigen Class

Unclassified

Antigen

Unclassified

Cell type

Cell type Class

Liver

Cell type

Liver

MeSH Description

A large lobed glandular organ in the abdomen of vertebrates that is responsible for detoxification, metabolism, synthesis and storage of various substances.

Sample

source_name

liver tissue

strain

CAST/EiJ

genotype

Wild-type

treatment

Clean-air

tissue

liver

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

TruSeq libraries were constructed as per manufacturer's recommendations.

Sequencing Platform

instrument_model

Illumina HiSeq 2500

mm10

Number of total reads

76237774

Reads aligned (%)

58.8

Duplicates removed (%)

18.9

Number of peaks

27423 (qval < 1E-05)

mm9

Number of total reads

76237774

Reads aligned (%)

58.7

Duplicates removed (%)

18.9

Number of peaks

27531 (qval < 1E-05)