SRX353841
GSM1234533: C646 K27ac; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
E14 ES cells
background strain
129/Ola
cell type
embryonic stem cells
genotype/variation
wild type

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Libraries were prepared according to Illumina's instructions accompanying the DNA Sample Kit (Part# 0801-0303).

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
62792733
Reads aligned (%)
87.1
Duplicates removed (%)
13.6
Number of peaks
41523 (qval < 1E-05)

mm9

Number of total reads
62792733
Reads aligned (%)
86.8
Duplicates removed (%)
13.6
Number of peaks
41533 (qval < 1E-05)

Base call quality data from DBCLS SRA