Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

strain
C57BL/6
age
missing
sex
male
tissue
Embryonic stem cell
cell_line
Flag-Dres1 mESC
growth_protocol
Embryonic stem cells were maintained in Dulbecco's modified Eagle's medium (Sigma) containing 10% Knockout SR (Invitrogen), 1% fetal bovine serum (bio west), MEM Non-Essential Amino Acids Solution (Gibco), 0.1% LIF and 2-Mercaptoethanol (Nacalai tesque) described as ES medium hereafter).
sample_type
ChIP

Sequenced DNA Library

library_name
Dres1_ChIP
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 1500

mm10

Number of total reads
28546547
Reads aligned (%)
97.6
Duplicates removed (%)
12.8
Number of peaks
369 (qval < 1E-05)

mm9

Number of total reads
28546547
Reads aligned (%)
97.4
Duplicates removed (%)
12.9
Number of peaks
305 (qval < 1E-05)

Base call quality data from DBCLS SRA