SRX3432534
ChIP seq of H3K27me3 in dental pulp pericyte

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Others
Cell type
Incisor pulp
NA
NA

Attributes by original data submitter

Sample

strain
XlacZ4
age
5 days old
sex
pooled male and female
tissue
Incisor pulp
ChIP Material
H3K27Me3

Sequenced DNA Library

library_name
DPK27
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
45365502
Reads aligned (%)
92.3
Duplicates removed (%)
32.1
Number of peaks
244 (qval < 1E-05)

mm9

Number of total reads
45365502
Reads aligned (%)
92.2
Duplicates removed (%)
32.1
Number of peaks
224 (qval < 1E-05)

Base call quality data from DBCLS SRA