Antigen

Antigen Class

Bisulfite-Seq

Antigen

Bisulfite-Seq

Cell type

Cell type Class

Blood

Cell type

Pro-B cells

NA

NA

Sample

source_name

Ebf1-deficient B cell progenitors_0 hours

cell type

Ebf1-deficient B cell progenitors

stage post 4-oht treatment

0 hours

stage post 4-oht treatment

bisulfite-treated genomic DNA

Sequenced DNA Library

library_strategy

Bisulfite-Seq

library_source

GENOMIC

library_selection

RANDOM

library_construction_protocol

Genomic DNA was prepared using DNeasy Blood & Tissue Kit (Qiagen) according to manufacturer's instructions. Libraries were prepared via theEpiTect Bisulfite and Illumina Truseq PCRFree DNA library preparation protocol according to manufacturer's instructions

Sequencing Platform

instrument_model

Illumina HiSeq 2500

mm10

Number of total reads

459478251

Reads aligned (%)

65.6

Coverage rate (×)

9.3

Number of hyper MRs

201193 (qval < 1E-05)

mm9

Number of total reads

459478251

Reads aligned (%)

66.7

Coverage rate (×)

9.2

Number of hyper MRs

200700 (qval < 1E-05)