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For mm10
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For mm9
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For mm10
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For mm9
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For mm10
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For mm9
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: H3K9me3
wikigenes
PDBj
CellType: Leukocyte stem cells
ATCC
MeSH
RIKEN BRC
SRX3384717
GSM2850433: BM iLS H3K9me3 day7 rep1; Mus musculus; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
Histone
Antigen
H3K9me3
Cell type
Cell type Class
Blood
Cell type
Leukocyte stem cells
NA
NA
Attributes by original data submitter
Sample
source_name
bone marrow induced leukocyte stem
strain
C57BL/6
chip antibody
H3K9me3 antibody (#MABI0308, Medical & Biological Laboratories)
Sequenced DNA Library
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Genomic DNA was isolated using QIAGEN All-prep kit. Library was prepared according to Illumina TruSeq protocol.
Sequencing Platform
instrument_model
Illumina HiSeq 1500
Where can I get the processing logs?
Read processing pipeline
log
mm10
Number of total reads
45377075
Reads aligned (%)
96.7
Duplicates removed (%)
32.1
Number of peaks
887 (qval < 1E-05)
mm9
Number of total reads
45377075
Reads aligned (%)
96.1
Duplicates removed (%)
31.9
Number of peaks
1026 (qval < 1E-05)
Base call quality data from
DBCLS SRA