Antigen

Antigen Class

Histone

Antigen

H3K9me3

Cell type

Cell type Class

Blood

Cell type

Bone Marrow Cells

MeSH Description

Cells contained in the bone marrow including fat cells (see ADIPOCYTES); STROMAL CELLS; MEGAKARYOCYTES; and the immediate precursors of most blood cells.

Sample

source_name

bone marrow

strain

C57BL/6

chip antibody

H3K9me3 antibody (#MABI0308, Medical & Biological Laboratories)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Genomic DNA was isolated using QIAGEN All-prep kit. Library was prepared according to Illumina TruSeq protocol.

Sequencing Platform

instrument_model

Illumina HiSeq 1500

mm10

Number of total reads

95969148

Reads aligned (%)

95.0

Duplicates removed (%)

69.8

Number of peaks

40082 (qval < 1E-05)

mm9

Number of total reads

95969148

Reads aligned (%)

94.4

Duplicates removed (%)

69.8

Number of peaks

40588 (qval < 1E-05)